(*Bates student)

  1. A. Andonian*, D. Paseltiner*, T. J. Gould, and J. B. Castro. “A Deep Learning Pipeline for Large-Scale Classification, Registration, and Clustering of In-Situ Hybridization Experiments in the Mouse Olfactory Bulb,” Journal of Neuroscience Methods, 312:162-168, 2019.
  2. T. J. Gould, K. Toth, N. Mucke, J. Langowski, A. Hakusui*, A. L. Olins, and D. E. Olins. “Defining the Epichromatin Epitope,” Nucleus, 8:625-640, 2017.
  3. Pennacchietti, T. J. Gould, and S. T. Hess. “The Role of Probe Photophysics in Localization-Based Superresolution Microscopy.” Biophysical Journal, 113:2037-2054, 2017.
  4. T. J. Gould, L. K. Schroeder, P. A. Pellett, and J. Bewersdorf. “STED Microscopy.” In U. Kubitscheck (Ed.), Fluorescence Microscopy: From Principles to Biological Application, 2nd edition. Wiley-Blackwell, 2017.
  5. B. R. Patton, D. Burke, D. Owald, T. J. Gould, J. Bewersdorf, & M. J. Booth. “Deep Tissue Three-Dimensional STED Nanoscopy Through Dual Adaptive Optics,” Optics Express 24:8862-8876, 2016.
  6. J. B. Castro & T. J. Gould. “Neuro at the Nanoscale: Diffraction-Unlimited Imaging with STED Nanoscopy” Journal of Histochemistry & Cytochemistry, 63(12):897-907, 2015.
  7. M. Stagi, Z. A. Klein, T. J. Gould, J. Bewersdorf, and S. M. Strittmatter. “Lysosome Size, Motility and Stress Response Regulated by Fronto-Temporal Dementia Modifier TMEM106B.” Molecular and Cellular Neuroscience 61:226-240, 2014.
  8. F. Wilfling, A. R. Thiam, T. J. Gould, E. S. Allgeyer, F. Pincet, J. E. Rothman, J. Bewersdorf, R. V. Farese, and T. C. Walther. “COPI Machinery Modulates Lipid Droplet Surfaces to Mediate Protein Targeting.” eLife, 3:e01607, 2014.
  9. T. J. Gould, P. A. Pellett, and J. Bewersdorf. “STED Microscopy.” Fluorescence Microscopy: From Physical Background to Biological Application, 2013.
  10. K. F. Lechtreck, T. J. Gould, and G. B. Witman. “Flagellar Central Pair Assembly in Chlamydomonas Reinhardtii.” Cilia 2:15, 2013.
  11. K. A. Gabor, C. R. Stevens, M. J. Pietraszewski, T. J. Gould, S. H. Lam, Z. Gong, S. T. Hess, and C. H. Kim. “Super Resolution Microscopy Reveals that Caveolin-1 is Required for Anitviral Immune Response,” PLoS One 8:e68759, 2013.
  12. T. J. Gould, E. B. Kromann, D. Burke, M. J. Booth, and J. Bewersdorf. “An Auto-Aligning STED Microscope using Adaptive Optics,” Optics Letters 38:1860-1862, 2013.
  13. M. V. Gudheti, N. M. Curthoys, T. J. Gould, D. Kim, M. S. Gunewardene, K. A. Gabor, J. A. Gosse, C. H. Kim, J. Zimmerberg, and S. T. Hess. “Actin Mediates the Nanoscale Membrane Organization of the Clustered Membrane Protein Influenza Hemagglutinin.” Biophysical Journal 104:2182-2192, 2013.
  14. F. Wilfling, H. Wang, J. T. Haas, N. Krahmer, T. J. Gould, A. Uchida, J. Cheng, M. Graham, R. Christiano, F. Froehlich, X. Liu, K. K. Buhman, R. A. Coleman, J. Bewersdorf, R. V. Farese, Jr, and T. C. Walther. “Triacylglycerol Synthesis Enzymes Mediate Lipid Droplet Growth by Relocalizing from the ER to Lipid Droplets,” Developmental Cell 24:1-16, 2013.
  15. T. J. Gould, D. Burke, J. Bewersdorf, and M. J. Booth. “Adaptive Optics Enables 3D STED Microscopy in Aberrating Specimens.” Optics Express 20:20998-21009, 2012.
  16. E. B. Kromann, T. J. Gould, M. F. Juette, J. E. Wilhjelm, and J. Bewersdorf. “Quantitative Pupil Analysis in STED Microscopy Using Phase Retrieval.” Optics Letters 37:1805-1807, 2012.
  17. T. J. Gould and J. Bewersdorf. “Nanoscopy at Low Light Intensities Shows Its Potential.” eLife, 1:e00475, 2012.
  18. C. Lv, T. J. Gould, J. Bewersdorf, & D. Zenisek. “High Resolution Optical Imaging of Zebrafish Larval Ribbon Synapse protein RIBEYE, RIM2, and CaV1.4 by STED Microscopy.” Microscopy & Microanalysis 18:745-752, 2012.
  19. T. J. Gould, S. T. Hess, and J. Bewersdorf. “Optical Nanoscopy: from Acquisition to Analysis.” Annual Review of Biomedical Engineering 14:231-254, 2012.
  20. M. S. Gunewardene, F. V. Subach, T. J. Gould, G. P. Penoncello, M. V. Gudheti, V. V. Verkhusha, and S. T. Hess. “Super-resolution Imaging of Multiple Fluorescent Proteins with Highly Overlapping Emission Spectra.” Biophysical Journal 101:1522-1528, 2011.
  21. T. J. Gould, J. R. Myers, and J. Bewersdorf. “Total Internal Reflection STED Microscopy.” Optics Express 19:13351-13357, 2011.
  22. P. A. Pellett, X. Sun, T. J. Gould, J. E. Rothman, M. Xu, I. R. Correa, and J. Bewersdorf. “Two-Color STED Microscopy in Living Cells.” Biomedical Optics Express 2:2364-2371, 2011.
  23. M. F. Juette, T. J. Gould, and J. Bewersdorf. “Super-resolution Far-field Fluorescence Microscopy.” Nano-Biophotonics, 2010.
  24. M. V. Gudheti, T. J. Gould, and S. T. Hess. “Fluorescence Photoactivation Localization Microscopy.” Nanoscopy and Multidimensional Optical Fluorescence Microscopy, 2010.
  25. K. S. Morozova, K. D. Piatkevich, T. J. Gould, J. Zhang, J. Bewersdorf, and V. V. Verkhusha. “Far-Red Fluorescent Protein Excitable with Red Lasers for Flow Cytometry and Super-Resolution STED Imaging.” Biophysical Journal 99:L13-L15, 2010.
  26. T. J. Gould, V. V. Verkhusha, and S. T. Hess. “Imaging Biological Structures with Fluorescence Photoactivation Localization Microscopy.” Nature Protocols 4:291-308, 2009.
  27. S. T. Hess, T. J. Gould, M. Gunewardene, M. D. Mason, and J. Bewersdorf. “Ultra-High Resolution Imaging of Biomolecules by Fluorescence Photoactivation Localization Microscopy (FPALM).” Methods in Molecular Biology 544:483-522, 2009.
  28. T. J. Gould, M. S. Gunewardene, M. V. Gudheti, V. V. Verkhusha, S. Yin, J. A. Gosse, and S.T. Hess. “Nanoscale Imaging of Molecular Positions and Anisotropies.” Nature Methods 5:1027-1030, 2008.
  29. M. F. Juette, T. J. Gould, M. D. Lessard, M. J. Mlodzianoski, B. S. Nagpure, B. T. Bennett, S.T. Hess, and J. Bewersdorf. “Three-Dimensional sub-100 nm Resolution Fluorescence Microscopy of Thick Samples.” Nature Methods, 5:527-529, 2008.
  30. T. J. Gould, J. Bewersdorf, and S. T. Hess. “A Quantitative Comparison of the Photophysical Properties of Select Quantum Dots and Organic Fluorophores.” Z. Phys. Chem. 222:833-849, 2008.
  31. T. J. Gould and S. T. Hess. “Nanoscale Imaging of Intracellular Fluorescent Proteins: Breaking the Diffraction Barrier.” Methods in Cell Biology 89:329-358, 2008.
  32. S. T. Hess, T. J. Gould, M. V. Gudheti, S. Maas, K. Mills, and J. Zimmerberg. “Dynamic Clustered Distribution of Hemagglutinin Resolved at 40 nm in Living Cell Membranes Discriminates Between Raft Theories.” PNAS 104:17370-17375, 2007.
  33. J. A. Rochira, M. V. Gudheti, T. J. Gould, R. R. Laughlin, J. L. Nadeau, and S. T. Hess. “Fluorescence Intermittency Limits Brightness in CdSe/ZnS Nanoparticles Quantified by Fluorescence Correlation Spectroscopy.” J. Phys. Chem. C 111:1695-1708, 2007.
  34. V. E. Guiseppe, T. J. Gould, and C. T. Hess. “Spatial Variation of Waterborne Radon and Temporal Variation of Radon in Water at Nine Maine Schools.” Health Physics 92:358-365, 2007.
  35. T. J. Gould and C. T. Hess. “Measuring and Modeling Exposure from Environmental Radiation on Tidal Flats.” Nuclear Instruments & Methods in Physics Research A 537:658-665, 2005.